Chromosomal variations and genetic diversity in subpopulations of Senna alexandrina Mill. from Western Thar, India

Authors

  • Sunita Arora Department of Botany, Jai Narain Vyas University, Jodhpur, Rajasthan
  • Monika Vyas Department of Botany, Jai Narain Vyas University, Jodhpur, Rajasthan
  • Meena Barupal Department of Botany, Jai Narain Vyas University, Jodhpur, Rajasthan

DOI:

https://doi.org/10.36253/caryologia-2927

Keywords:

Cytogenetic analysis, chromosomes

Abstract

Homologous recombination promotes genetic diversity by exchanging genetic material between homologs, ensuring unique combinations of alleles in offspring. Karyomorphology of the chromosomes can prove to be an efficient tool to reveal the true nature of plant species at genetic level. In this context, our study analyzed the karyomorphology and male meiosis in a medicinal herb, Senna (Senna alexandrina Mill., Syn. Cassia angustifolia Vahl.), family Fabaceae which is known for its significant polymorphic variations. By observing chromosomal variances, we aimed to shed light on the underlying genetic variations responsible for the observed polymorphism. All the accessions of Senna examined in this study exhibited a diploid chromosome number of 2n = 28. We found variations in the chiasma frequencies of almost all the accessions, particularly concerning the observed number of bivalents, quadrivalents, position of centromere and the presence of the B- chromosome at meiosis-I. Amongst the four accessions studied, two displayed reduced pollen stainability, which seems to be correlated with a lower frequency of chiasmata and the influences of the collection sites, that was confirmed by the regression analysis. Further, RAPD analysis also confirmed the variations in DNA homologous sequences recorded by the presence of variable length of the fragments in all accessions. All the results collectively underscored the existence of genetic diversity within the subpopulation of Senna alexandrina Mill. & may help to comprehend the broader evolutionary processes within the Fabaceae family.

Downloads

Download data is not yet available.

Author Biography

Monika Vyas, Department of Botany, Jai Narain Vyas University, Jodhpur, Rajasthan

Teacher, Govt.  Education system

References

Ahmed et al. SSR and RAPD analysis of genetic diversity in walnut (Juglans regia L.) genotypes from Jammu and Kashmir, India. Physiology and Molecular Biology of Plants, 2012, 18, 149-160.

Biondo, Miotto, & Schifino-Wittmann. Cytogenetics of species of Chamaecrista (Leguminosae–Caesalpinioideae) native to southern Brazil. Botanical Journal of the Linnean Society, 2006, 150(4), 429-439.

Chesnokov, Kosolapov, & Savchenko. Morphological genetic markers in plants. Russian Journal of Genetics, 2020, 56, 1406-1415.

Cordeiro & Felix. Intra-and interspecific karyotypic variations of the genus Senna Mill. (Fabaceae, Caesalpinioideae). Acta Botanica Brasilica, 2017, 32, 128-134.

De Storme & Mason. Plant speciation through chromosome instability and ploidy change: cellular mechanisms, molecular factors and evolutionary relevance. Current Plant Biology, 2014, 1, 10-33.

Deakin et al. Chromosomics: Bridging the gap between genomes and chromosomes. Genes, 2019, 10(8), 627.

Doyle & Coate. Polyploidy, the nucleotype, and novelty: the impact of genome doubling on the biology of the cell. International Journal of Plant Sciences, 2019, 180(1), 1-52.

Elaine, Miotto, Schifino-Wittmann, & De Castro. Cytogenetics and cytotaxonomy of Brazilian species of Senna Mill. (Cassieae-Caesalpinioideae-Leguminosae). Caryologia, 2005, 58(2), 152-163.

Gill & Husaini. Cytology of some arborescent Leguminosae of Nigeria. Silvae Genetica, 1982, 31(4), 117-122.

He et al. Five Fabaceae karyotype and phylogenetic relationship analysis based on oligo-FISH for 5S rDNA and (AG3T3)3. Genes, 2022, 13(5), 768.

Irwin & Turner. Chromosomal relationships and taxonomic considerations in the genus Cassia. American Journal of Botany, 1960, 47(4), 309-318.

Jha & Halder. Evaluation of karyotype diversity in Indian traditional aromatic rice cultivars through EMA-based non-fluorescent Giemsa and fluorescent DAPI staining. Genetic Resources and Crop Evolution, 2023, 1-22.

Kader, Sinha, & Ghosh. Clonal fidelity investigation of micropropagated hardened plants of jackfruit tree (Artocarpus heterophyllus L.) with RAPD markers. Journal of Genetic Engineering and Biotechnology, 2022, 20(1), 145.

Kaur & Singhal. Meiotic abnormalities affect genetic constitution and pollen viability in dicots from Indian cold deserts. BMC Plant Biology, 2019, 19, 1-11.

Kumar, Gupta, & Lal. Recent advances in the genetic parameters and prospects of cultivation of the climate-smart herb Senna (Senna alexandrina Mill.): A significant industrial medicinal crop. Ecological Genetics and Genomics, 2024a, 100248.

Kumar et al. Estimation of genetic diversity utilizing gene-targeted SCoT markers and morpho-chemotypic analyses in Senna alexandrina Mill. (Senna). Ecological Genetics and Genomics, 2024b, 100252.

Kumar et al. An assessment, prospects, and obstacles of industrially important medicinal crop Indian Senna (Cassia angustifolia Vahl.): A review. Industrial Crops and Products, 2022, 187, 115472.

Kumar, Tripathi, & Mishra. Cyto-systematical study of the genus Senna Mill. in diverse geographical locations of Uttar Pradesh. Electronic Journal of Plant Breeding, 2021, 12(3), 812-820.

Laghari et al. Extraction, identification and antioxidative properties of the flavonoid-rich fractions from leaves and flowers of Cassia angustifolia. American Journal of Analytical Chemistry, 2011, 2(08), 871.

Lucas et al. A chromosome-scale genome assembly of European hazel (Corylus avellana L.) reveals targets for crop improvement. The Plant Journal, 2021, 105(5), 1413-1430.

Marsjan & Oldenbroek. Molecular markers, a tool for exploring genetic diversity. The State of the World’s Animal Genetic Resources for Food and Agriculture, 2006, 319-337.

Nayan et al. Leaf powder supplementation of Senna alexandrina ameliorates oxidative stress, inflammation, and hepatic steatosis in high-fat diet-fed obese rats. PLOS ONE, 2021, 16(4), e0250261.

Nguyen et al. Comparative triple-color FISH mapping in eleven Senna species using rDNA and telomeric repeat probes. Horticulture, Environment, and Biotechnology, 2021, 62, 927-935.

Nonić & Šijačić-Nikolić. Genetic diversity: sources, threats, and conservation. Life on Land, 2021, 421-435.

Oladeji, Adelowo, & Oluyori. The genus Senna (Fabaceae): A review on its traditional uses, botany, phytochemistry, pharmacology and toxicology. South African Journal of Botany, 2021, 138, 1-32.

Omondi et al. Molecular markers for genetic diversity studies in African leafy vegetables. Advances in Bioscience and Biotechnology, 2016, 7(3), 188-197.

Osman et al. Distal bias of meiotic crossovers in hexaploid bread wheat reflects spatio-temporal asymmetry of the meiotic program. Frontiers in Plant Science, 2021, 12, 631323.

Pagliarini. Meiotic behavior of economically important plant species: the relationship between fertility and male sterility. Genetics and Molecular Biology, 2000, 23, 997-1002.

Pellerin, Waminal, & Kim. FISH mapping of rDNA and telomeric repeats in 10 Senna species. Horticulture, Environment, and Biotechnology, 2019, 60, 253-260.

Rawat, Kumar, & Rao. Studies on cytogenetical variation in Prosopis cineraria (Linn.) Druce–A keystone tree species of Indian desert. Silvae Genetica, 2007, 56(1-6), 184-189.

Resende, Davide, & Torres. Chromosome number and meiosis in populations of Senna species (Caesalpinioideae–Fabaceae) from Southeast Brazil. Caryologia, 2013, 66(1), 1-5.

Saudan. Senna (Cassia angustifolia Vahl.): recent advances in pharmacognosy and prospects of cultivation in India. Bioved, 2018, 29(2), 399-408.

Shaily et al. Senna alexandrina leaf powder supplementation prevents hepatic inflammation and fibrosis in CCl4-induced Swiss albino mice. Clinical Nutrition Open Science, 2023, 51, 136-148.

Stebbins. Chromosomal evolution in higher plants. Chromosomal Evolution in Higher Plants, 1971.

Strelnikova, Komakhin, & Zhuchenko. Variability of chiasma frequencies in different tomato species. Cell and Tissue Biology, 2019, 13, 321-329.

Vimala, Lavania, & Lavania. Chromosome change and karyotype differentiation–implications in speciation and plant systematics. The Nucleus, 2021, 64, 33-54.

Vitales et al. Genome size variation at constant chromosome number is not correlated with repetitive DNA dynamism in Anacyclus (Asteraceae). Annals of Botany, 2020, 125(4), 611-623.

Weiss-Schneeweiss & Schneeweiss. Karyotype diversity and evolutionary trends in angiosperms. Plant Genome Diversity Volume 2: Physical Structure, Behaviour and Evolution of Plant Genomes, 2012, 209-230.

Young, Sarath, & Tobias. Karyotype variation is indicative of subgenomic and ecotypic differentiation in switchgrass. BMC Plant Biology, 2012, 12(1), 1-12.

Downloads

Published

2024-11-14

How to Cite

Arora, S., Vyas, M., & Barupal, M. (2024). Chromosomal variations and genetic diversity in subpopulations of Senna alexandrina Mill. from Western Thar, India. Caryologia, 77(2), 37–48. https://doi.org/10.36253/caryologia-2927

Issue

Section

Articles